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trixi-framework
GitHub Repository: trixi-framework/Trixi.jl
 Path: blob/main/examples/tree_1d_dgsem/elixir_advection_amr_nonperiodic.jl
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using OrdinaryDiffEqLowStorageRK

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using Trixi

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###############################################################################

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# semidiscretization of the linear advection equation

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advection_velocity = 1.0

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equations = LinearScalarAdvectionEquation1D(advection_velocity)

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initial_condition = initial_condition_gauss

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boundary_conditions = BoundaryConditionDirichlet(initial_condition)

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solver = DGSEM(polydeg = 3, surface_flux = flux_lax_friedrichs)

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coordinates_min = (0.0,)

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coordinates_max = (5.0,)

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mesh = TreeMesh(coordinates_min, coordinates_max,

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                initial_refinement_level = 4,

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                n_cells_max = 10_000,

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                periodicity = false)

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semi = SemidiscretizationHyperbolic(mesh, equations,

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                                    initial_condition,

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                                    solver; boundary_conditions = boundary_conditions)

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###############################################################################

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# ODE solvers, callbacks etc.

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tspan = (0.0, 5.0)

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ode = semidiscretize(semi, tspan)

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summary_callback = SummaryCallback()

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analysis_interval = 100

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analysis_callback = AnalysisCallback(semi, interval = analysis_interval,

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                                     extra_analysis_integrals = (entropy,))

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alive_callback = AliveCallback(analysis_interval = analysis_interval)

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save_restart = SaveRestartCallback(interval = 100,

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                                   save_final_restart = true)

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save_solution = SaveSolutionCallback(interval = 100,

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                                     save_initial_solution = true,

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                                     save_final_solution = true,

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                                     solution_variables = cons2prim)

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amr_controller = ControllerThreeLevel(semi, IndicatorMax(semi, variable = first),

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                                      base_level = 4,

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                                      med_level = 5, med_threshold = 0.1,

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                                      max_level = 6, max_threshold = 0.6)

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amr_callback = AMRCallback(semi, amr_controller,

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                           interval = 5,

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                           adapt_initial_condition = true,

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                           adapt_initial_condition_only_refine = true)

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stepsize_callback = StepsizeCallback(cfl = 1.6)

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callbacks = CallbackSet(summary_callback,

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                        analysis_callback, alive_callback,

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                        save_restart, save_solution,

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                        amr_callback, stepsize_callback);

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###############################################################################

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# run the simulation

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sol = solve(ode, CarpenterKennedy2N54(williamson_condition = false);

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            dt = stepsize_callback(ode), # solve needs some value here but it will be overwritten by the stepsize_callback

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            ode_default_options()..., callback = callbacks);

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